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Druggable Targets Found for Treating Rare, Deadly Nerve Cancer MPNST

Study led by experts at Cincinnati Children’s uses single-cell analyses to discover new cell type that drives disease progression, finds ways to control that cell’s function, and demonstrates treatment success in mice

Very few people, other than professionals and those close to the young people who have this rare form of cancer have ever heard of a malignant peripheral nerve sheath tumor (MPNST).

Across the United States population of nearly 331 million people, about 13,000 people a year will be diagnosed with any form of soft tissue sarcoma. Only 5% to 10% of those cases will be MPNST, according to the National Cancer Institute and the American Cancer Society.

Unfortunately, MPNST is as devastating as it is infrequent. Despite existing forms of surgery, radiation therapy and chemotherapy, the five-year survival rate for MPNST ranges from 23% to 69%, depending largely on how far the cancer has spread when diagnosed.

Now, new research from Cincinnati Children’s offers one of the strongest possibilities in years for improved treatment. The study, published Nov. 2, 2022, in Science Advances, was led by first author Lai Man Natalie Wu, PhD, Division of Experimental Hematology and Cancer Biology, and principal investigator Qing Richard Lu, PhD,  Scientific Director, Brain Tumor Center, Division of Experimental Hematology and Cancer Biology at Cincinnati Children’s.

The research is still at the preclinical stage, but after conducting a host of experiments that dissected these tumors one cell at a time to understand how they form and spread, the scientists used their insights to show significant disease improvement in mice.

Several years of work remain ahead to translate these findings into a better chemotherapy for people, but a new path has opened. A path that might also benefit people beyond those with MPNST.

“In discovering and studying this previously unrecognized subpopulation of mesenchymal neural-crest-like cells and their role in driving the malignancy of this cancer, we have found multiple druggable targets that merit further study as potential treatments for MPNST,” Lu says.

From NF1 to MPNST

About half of all MPNST cases occur among people previously diagnosed with neurofibromatosis type 1 (NF1), a genetic disorder that causes non-malignant but often life-disrupting nerve tumors to appear in a variety of locations on the body.

Experts at Cincinnati Children’s have been pioneers in studying NF1, producing much of the basic science discovery that led to the 2020 U.S. FDA approval of selumetinib – the first approved treatment available for children aged 2 and older. This study digs into how MPNST arises from NF1.

Two genes emerge as targets

The team found that NF tumors transform into malignancies by acquiring a subpopulation of cells functioning in “mesenchymal neural crest stem-like states.” Signals from these cells remodel the tumor microenvironment, encouraging rapid growth and spread through a process known as the epithelial-to-mesenchymal transition (EMT), which endows benign tumor cells with malignant traits such as migration, invasion, and chemoresistance.

The study details a transcription factor network that regulates much of the complex molecular signaling involved. Specifically, the team identified that two genes ZEB1 and ALDH1A1 are critical to producing MPNST cells. Knocking down these genes in mice slowed tumor growth and reduced tumor cell proliferation.

“Detecting the activity of these genes could serve as biomarkers to detect which patients with NF1 might be on a more dangerous cancer path. Disrupting these genes’ ability to accelerate tumor growth could help treat the disease,” Wu says.

Next steps

Lu and colleagues have begun work on identifying small-molecule compounds that can affect the signaling pathways supporting the dangerous subset of cells in MPNST tumors. Meanwhile, they have made their molecular and cellular blueprint of the transcriptional states and drivers for malignant transformation in MPNSTs available for scientists to analyze at the interactive web server https://viz.stjude.cloud/yu-lab/collection/MPNST-Lu-lab~11.

About this study

Cincinnati Children’s co-authors included: Feng Zhang, PhD, Rohit Rao, MD, PhD, Mike Adam, MS, Sara Szabo, MD, PhD, Xuezhao Liu, PhD, Katie Belcher, BS, Zaili Luo, PhD, Sean Ogurek, BS, Mei Xin, PhD, and Steven Potter, PhD.

Collaborating co-authors included Li Zhang, PhD, at the University of Cincinnati and experts at Johns Hopkins University School of Medicine, St. Jude Children’s Research Hospital, Washington University School of Medicine, The Ohio State University, and Harvard Medical School.

Funding sources included grants from the Cincinnati Children’s Research Foundation, the National Institutes of Health (R37 NS096359), the Department of Defense (W81WXH2010443), a Pablove Foundation Childhood Cancer Research Seed Grant, a Sarcoma Foundation of America Zachary Cohen Memorial Research Award and the Neurofibromatosis Therapeutic Acceleration Program.

Learn more about MPNST
Learn more about cancer biology and neural tumor research at Cincinnati Children’s
Learn more about neurofibromatosis care at Cincinnati Children’s
Publication Information
Original title: Single-cell multi-omics identifies clinically relevant mesenchymal stem-like cells and key regulators for MPNST malignancy
Published in: Science Advances
Publish date: Nov. 2, 2022
Read the Study

Research By

Natalie-Wu.jpg
Lai Man Natalie Wu, PhD
Division of Experimental Hematology and Cancer Biology
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Qing Richard Lu, PhD
Scientific Director, Brain Tumor Center
Research in the Lu Lab aims to understand how distinct glial cell subtypes (oligodendrocytes, astrocytes and Schwann cells) in the central and peripheral nervous systems are generated, how they are regenerated after injury, and how their progenitors are transformed into cancerous cells under pathological conditions.